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changed run- scripts to use big.*, added big big.* files

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git-svn-id: svn://anubis/gvsu@181 45c1a28c-8058-47b2-ae61-ca45b979098e
This commit is contained in:
josh 2008-09-27 15:59:37 +00:00
parent 8182bdd1b1
commit 1b61df2ad1
4 changed files with 11794 additions and 2 deletions
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11776
cs677/pa2/big.seq Normal file
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File diff suppressed because it is too large Load Diff

16
cs677/pa2/big.unk Normal file
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@ -0,0 +1,16 @@
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT
TTTTTTAGGGAAAATTTGGCCTTCCA?CAAGGGGAGGCCAGG?AATTT

2
cs677/pa2/run-sequential
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@ -1,2 +1,2 @@
#!/bin/sh
time ./sequential HIV-1_db.fasta HIV-1_Polymerase.txt
time ./sequential big.seq big.unk

2
cs677/pa2/run-threaded
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@ -1,2 +1,2 @@
#!/bin/sh
time ./threaded -n 2 HIV-1_db.fasta HIV-1_Polymerase.txt
time ./threaded -n 2 big.seq big.unk