moved shared data into global variables, removed SMArg struct
git-svn-id: svn://anubis/gvsu@167 45c1a28c-8058-47b2-ae61-ca45b979098e
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@ -15,19 +15,15 @@ using namespace std;
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#define eq(x, y) ( ( (x) == (y) ) || ( (x) == '?' ) || ( (y) == '?' ) )
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typedef struct
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{
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vector<char> * s;
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vector<char> * t;
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int id;
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void * matrix;
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} SMArg;
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void usage(char * prog);
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void * calcSimMatrixThread(void * arg);
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bool readFile(char * fileName, vector<char> & v);
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pthread_barrier_t barrier;
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int num_threads;
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int * matrix;
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vector<char> * s;
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vector<char> * t;
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/* Print basic usage information */
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void usage(char * prog)
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@ -39,7 +35,7 @@ void usage(char * prog)
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int main(int argc, char * argv[])
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{
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vector<char> files[2];
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int num_threads = 1;
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num_threads = 1;
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int file_to_read = 0;
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for (int i = 1; i < argc; i++)
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@ -64,19 +60,15 @@ int main(int argc, char * argv[])
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if (file_to_read != 2)
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usage(argv[0]);
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s = &files[0];
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t = &files[1];
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pthread_t * threads = new pthread_t[num_threads];
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int * similarityMatrix = new int[files[0].size() * files[1].size()];
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matrix = new int[files[0].size() * files[1].size()];
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pthread_barrier_init(&barrier, NULL, num_threads);
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for (int i = 0; i < num_threads; i++)
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{
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SMArg * arg = new SMArg;
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arg->s = &files[0];
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arg->t = &files[1];
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arg->id = i;
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arg->matrix = similarityMatrix;
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int ret = pthread_create(&threads[i], NULL, &calcSimMatrixThread, arg);
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int ret = pthread_create(&threads[i], NULL, &calcSimMatrixThread, (void *) i);
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if (ret)
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{
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cerr << "Error " << ret << " when creating thread!" << endl;
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@ -91,6 +83,7 @@ int main(int argc, char * argv[])
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pthread_barrier_destroy(&barrier);
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delete[] matrix;
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delete[] threads;
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return 0;
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}
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@ -113,10 +106,10 @@ bool readFile(char * fileName, vector<char> & v)
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/* Compute portions of the similarity matrix between two character arrays */
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void * calcSimMatrixThread(void * arg)
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{
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SMArg * smarg = (SMArg *) arg;
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int s_size = smarg->s->size();
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int t_size = smarg->t->size();
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int (*F)[s_size][t_size] = (int (*) [s_size][t_size]) smarg->matrix;
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int id = (int) arg;
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int s_size = s->size();
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int t_size = t->size();
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int (*F)[s_size][t_size] = (int (*) [s_size][t_size]) matrix;
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int max_x = 0, max_y = 0, max_val = 0;
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for (int i = 0; i < t_size; i++) /* set first row to 0's */
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(*F)[0][i] = 0;
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@ -132,7 +125,7 @@ void * calcSimMatrixThread(void * arg)
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max(
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(*F)[i][j-1] - 2,
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(*F)[i-1][j-1] +
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(eq(smarg->s->at(i), smarg->t->at(j)) ? 1 : -1)
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(eq(s->at(i), t->at(j)) ? 1 : -1)
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),
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max(
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(*F)[i-1][j] - 2,
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@ -162,6 +155,5 @@ void * calcSimMatrixThread(void * arg)
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cout << "Maximum value is " << max_val << " at position ("
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<< max_x << ", " << max_y << ")" << endl;
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delete smarg;
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return NULL;
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}
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