44 lines
1.7 KiB
Plaintext
44 lines
1.7 KiB
Plaintext
[holtropj@eos01 ~/cs677/pa4]$ time mpirun -np 24 -hostfile ~/mpihosts ./maximum-parsimony phyloSequences.txt
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Lowest costs determined by processes:
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12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12
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Process 0 lowest-cost tree:
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TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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+-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| +-TGTCT{AC}{AT}AGGACTAAGCCATGCAAGTG{CT}AAGTAT{AG}AGT{AG}{AT}
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| | +-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| | `-TGTCTATAGGACTAAGCCATGCAAGTGCAAGTATGAGTGA
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| `-TGTCTCAA{AG}GA{CT}TAAGCCATGCA{AT}GT{CG}TAAGTATAA{AG}{CT}AT
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| +-TGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACAT
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| `-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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`-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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+-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| +-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| `-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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`-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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+-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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`-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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Labeled:
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TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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+-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| +-TGTCTAAAGGACTAAGCCATGCAAGTGCAAGTATAAGTAA
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| | +-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| | `-TGTCTATAGGACTAAGCCATGCAAGTGCAAGTATGAGTGA
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| `-TGTCTCAAAGACTAAGCCATGCAAGTCTAAGTATAAACAT
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| +-TGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACAT
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| `-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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`-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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+-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| +-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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| `-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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`-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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+-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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`-TGTCTCAAGGACTAAGCCATGCAAGTGTAAGTATAAGTAT
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real 0m1.866s
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user 0m0.233s
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sys 0m0.243s
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